BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024G02SP1|AL428264
(506 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1238 958 0.0
>3x_Contig1238
Length = 5289
Score = 958 bits (479), Expect = 0.0
Identities = 492/501 (98%)
Strand = Plus / Plus
Query: 6 tgcaacgagkcaagacggcacaacaatgcagttctcattgagcaaagaaaaaccatttca 65
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3776 tgcaacgaggcaagacggcacaacaatgcagttctcattgagcaaagaaaaaccatttca 3835
Query: 66 tttctcgaaggcgaagtcataccgtgactgctagatcagggctgtcatatttgattacwa 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3836 tttctcgaaggcgaagtcataccgtgactgctagatcagggctgtcatatttgattacta 3895
Query: 126 taamagccagagagctgtacatccatcaaractaatgagtggatacttktagctcgcgcg 185
||| |||||||||||||||| ||||||| |||||||||||||||||| |||||||||||
Sbjct: 3896 taacagccagagagctgtacttccatcacgactaatgagtggatacttgtagctcgcgcg 3955
Query: 186 atgctaagtgatagacgatatacgagaaaagcccgttcacgtgatatcttcttacacgtg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3956 atgctaagtgatagacgatatacgagaaaagcccgttcacgtgatatcttcttacacgtg 4015
Query: 246 actttaaatcctctccatgtgaaaatktccagagcgtccggatttcaatagaaactgacg 305
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4016 actttaaatcctctccatgtgaaaatgtccagagcgtccggatttcaatagaaactgacg 4075
Query: 306 aaaagctcgattaccggaaaacatcacagagtacatcttagtttatagtaaggtccaaca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4076 aaaagctcgattaccggaaaacatcacagagtacatcttagtttatagtaaggtccaaca 4135
Query: 366 atgtaatgtgaatgaattattggaggtgcgttgcagaaaaacatatagccattgagtgat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4136 atgtaatgtgaatgaattattggaggtgcgttgcagaaaaacatatagccattgagtgat 4195
Query: 426 ataagttgctatatcgagttattacagcgttgactattagctggactattagatctgcgg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4196 ataagttgctatatcgagttattacagcgttgactattagctggactattagatctgcgg 4255
Query: 486 agtttgatatatgastgcatg 506
|||||||||||||| ||||||
Sbjct: 4256 agtttgatatatgagtgcatg 4276
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2679
Number of Sequences: 1807
Number of extensions: 2679
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 506
length of database: 10,358,551
effective HSP length: 16
effective length of query: 490
effective length of database: 10,329,639
effective search space: 5061523110
effective search space used: 5061523110
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)